35 lines
1.2 KiB
Ruby
35 lines
1.2 KiB
Ruby
class Vsearch < Formula
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desc "Versatile open-source tool for microbiome analysis"
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homepage "https://github.com/torognes/vsearch"
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url "https://github.com/torognes/vsearch/archive/v2.15.0.tar.gz"
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sha256 "c5d6eca1e4bf0c6e28221356b806c1d2322b51c39f40888636ab094c4df2e231"
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bottle do
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cellar :any_skip_relocation
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sha256 "a184d6b0129488bd0bab5c9fac7c69fb8380abede5af74e47545563edced4a1a" => :catalina
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sha256 "1012a84e305c19914cfc54a708434eadf9490890c08c11e0fa0fb16f30edb230" => :mojave
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sha256 "c253a44e9a4eda0e486f96dbaa1fd4494e89572f768e7f09577f180899273fe6" => :high_sierra
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end
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depends_on "autoconf" => :build
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depends_on "automake" => :build
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def install
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system "./autogen.sh"
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system "./configure", "--disable-dependency-tracking",
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"--disable-silent-rules",
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"--prefix=#{prefix}"
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system "make"
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system "make", "install"
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end
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test do
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(testpath/"test.fasta").write <<~EOS
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>U00096.2:1-70
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AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC
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EOS
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system bin/"vsearch", "--rereplicate", "test.fasta", "--output", "output.txt"
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assert_predicate testpath/"output.txt", :exist?
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end
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end
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