48 lines
1.6 KiB
Ruby
48 lines
1.6 KiB
Ruby
class Beagle < Formula
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desc "Evaluate the likelihood of sequence evolution on trees"
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homepage "https://github.com/beagle-dev/beagle-lib"
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url "https://github.com/beagle-dev/beagle-lib/archive/v3.1.2.tar.gz"
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sha256 "dd872b484a3a9f0bce369465e60ccf4e4c0cd7bd5ce41499415366019f236275"
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bottle do
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cellar :any
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sha256 "032c922981ee1707934cceb53318a26dab4a0ca6c392db63115f626a9f56b412" => :mojave
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sha256 "d7834048b8aabdedcc824daf474cefe0436fdd8515da4df3f6c52a87d01395ef" => :high_sierra
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sha256 "87e49bf8faeff280ba1211a7c0a0b1626750652b0498eef2ff01dfcff4290056" => :sierra
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end
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depends_on "autoconf" => :build
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depends_on "automake" => :build
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depends_on "doxygen" => :build
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depends_on :java => [:build, :test]
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depends_on "libtool" => :build
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def install
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system "./autogen.sh"
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system "./configure", "--disable-dependency-tracking",
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"--disable-silent-rules",
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"--prefix=#{prefix}",
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"--without-cuda",
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"--disable-libtool-dev"
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system "make", "install"
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end
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test do
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(testpath/"test.cpp").write <<~EOS
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#include "libhmsbeagle/platform.h"
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int main() { return 0; }
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EOS
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(testpath/"T.java").write <<~EOS
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class T {
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static { System.loadLibrary("hmsbeagle-jni"); }
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public static void main(String[] args) {}
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}
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EOS
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system ENV.cxx, "-I#{include}/libhmsbeagle-1",
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testpath/"test.cpp", "-o", "test"
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system "./test"
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system "javac", "T.java"
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system "java", "-Djava.library.path=#{lib}", "T"
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end
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end
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