167 lines
5.6 KiB
Ruby
167 lines
5.6 KiB
Ruby
class R < Formula
|
|
desc "Software environment for statistical computing"
|
|
homepage "https://www.r-project.org/"
|
|
url "https://cran.r-project.org/src/base/R-4/R-4.2.2.tar.gz"
|
|
sha256 "0ff62b42ec51afa5713caee7c4fde7a0c45940ba39bef8c5c9487fef0c953df5"
|
|
license "GPL-2.0-or-later"
|
|
revision 1
|
|
|
|
livecheck do
|
|
url "https://cran.rstudio.com/banner.shtml"
|
|
regex(%r{href=(?:["']?|.*?/)R[._-]v?(\d+(?:\.\d+)+)\.t}i)
|
|
end
|
|
|
|
bottle do
|
|
sha256 arm64_ventura: "fc5834a3ae121615ddd4d37b9c9ead1eaa8a49ddb62924db85783e89eaca7523"
|
|
sha256 arm64_monterey: "da8a9d616ad6378683b2c053a1eb21979de6fb87f0b2a167dc817e3621efabd4"
|
|
sha256 arm64_big_sur: "27dfc85cb338bd47ab2c4d2056084c0c0c2b7b2e7274487da1d33c5b6e02f5b3"
|
|
sha256 ventura: "10efb9286514143cb2a29ed3722122434a844c70c211b9b6b1ae6aa6ac6efcc4"
|
|
sha256 monterey: "f7198e01cae195c5b91a8a2105fb1bfd5a76376f97b30c84f4e76fe3dff9c42a"
|
|
sha256 big_sur: "c30d89edffe0b4e6b56fea24ddf0b594e08b96d372d45767f052363647ba985c"
|
|
sha256 x86_64_linux: "7662bb5a6d42fdf07da6b41b2a47df8c8f9dc36f6e4438912826041c65c11b65"
|
|
end
|
|
|
|
depends_on "pkg-config" => :build
|
|
depends_on "cairo"
|
|
depends_on "gcc" # for gfortran
|
|
depends_on "gettext"
|
|
depends_on "jpeg-turbo"
|
|
depends_on "libpng"
|
|
depends_on "openblas"
|
|
depends_on "pcre2"
|
|
depends_on "readline"
|
|
depends_on "tcl-tk"
|
|
depends_on "xz"
|
|
|
|
uses_from_macos "curl"
|
|
uses_from_macos "icu4c"
|
|
uses_from_macos "libffi", since: :catalina
|
|
|
|
on_linux do
|
|
depends_on "libice"
|
|
depends_on "libtirpc"
|
|
depends_on "libx11"
|
|
depends_on "libxt"
|
|
depends_on "pango"
|
|
end
|
|
|
|
# needed to preserve executable permissions on files without shebangs
|
|
skip_clean "lib/R/bin", "lib/R/doc"
|
|
|
|
fails_with :gcc do
|
|
version "11"
|
|
cause "Unknown. FIXME."
|
|
end
|
|
|
|
# Patch to fix build on macOS Ventura, remove in next release
|
|
# https://bugs.r-project.org/show_bug.cgi?id=18426
|
|
patch do
|
|
on_ventura :or_newer do
|
|
url "https://raw.githubusercontent.com/Homebrew/formula-patches/d647f4e1d61c8dba5f15edf7a0fc567f681641fb/r/ventura.diff"
|
|
sha256 "0b3c230432ef6a9231eaf48f39fd22155d3e1c7cd4f2a497e96ff4bdc7d91b84"
|
|
end
|
|
end
|
|
|
|
def install
|
|
# BLAS detection fails with Xcode 12 due to missing prototype
|
|
# https://bugs.r-project.org/bugzilla/show_bug.cgi?id=18024
|
|
ENV.append "CFLAGS", "-Wno-implicit-function-declaration"
|
|
|
|
args = [
|
|
"--prefix=#{prefix}",
|
|
"--enable-memory-profiling",
|
|
"--with-tcl-config=#{Formula["tcl-tk"].opt_lib}/tclConfig.sh",
|
|
"--with-tk-config=#{Formula["tcl-tk"].opt_lib}/tkConfig.sh",
|
|
"--with-blas=-L#{Formula["openblas"].opt_lib} -lopenblas",
|
|
"--enable-R-shlib",
|
|
"--disable-java",
|
|
"--with-cairo",
|
|
# This isn't necessary to build R, but it's saved in Makeconf
|
|
# and helps CRAN packages find gfortran when Homebrew may not be
|
|
# in PATH (e.g. under RStudio, launched from Finder)
|
|
"FC=#{Formula["gcc"].opt_bin}/gfortran",
|
|
]
|
|
|
|
if OS.mac?
|
|
args << "--without-x"
|
|
args << "--with-aqua"
|
|
else
|
|
args << "--libdir=#{lib}" # avoid using lib64 on CentOS
|
|
|
|
# Avoid references to homebrew shims
|
|
args << "LD=ld"
|
|
|
|
# If LDFLAGS contains any -L options, configure sets LD_LIBRARY_PATH to
|
|
# search those directories. Remove -LHOMEBREW_PREFIX/lib from LDFLAGS.
|
|
ENV.remove "LDFLAGS", "-L#{HOMEBREW_PREFIX}/lib"
|
|
|
|
ENV.append "CPPFLAGS", "-I#{Formula["libtirpc"].opt_include}/tirpc"
|
|
ENV.append "LDFLAGS", "-L#{Formula["libtirpc"].opt_lib}"
|
|
end
|
|
|
|
# Help CRAN packages find gettext and readline
|
|
["gettext", "readline", "xz"].each do |f|
|
|
ENV.append "CPPFLAGS", "-I#{Formula[f].opt_include}"
|
|
ENV.append "LDFLAGS", "-L#{Formula[f].opt_lib}"
|
|
end
|
|
|
|
system "./configure", *args
|
|
system "make"
|
|
ENV.deparallelize do
|
|
system "make", "install"
|
|
end
|
|
|
|
cd "src/nmath/standalone" do
|
|
system "make"
|
|
ENV.deparallelize do
|
|
system "make", "install"
|
|
end
|
|
end
|
|
|
|
r_home = lib/"R"
|
|
|
|
# make Homebrew packages discoverable for R CMD INSTALL
|
|
inreplace r_home/"etc/Makeconf" do |s|
|
|
s.gsub!(/^CPPFLAGS =.*/, "\\0 -I#{HOMEBREW_PREFIX}/include")
|
|
s.gsub!(/^LDFLAGS =.*/, "\\0 -L#{HOMEBREW_PREFIX}/lib")
|
|
s.gsub!(/.LDFLAGS =.*/, "\\0 $(LDFLAGS)")
|
|
end
|
|
|
|
include.install_symlink Dir[r_home/"include/*"]
|
|
lib.install_symlink Dir[r_home/"lib/*"]
|
|
|
|
# avoid triggering mandatory rebuilds of r when gcc is upgraded
|
|
check_replace = OS.mac?
|
|
inreplace lib/"R/etc/Makeconf", Formula["gcc"].prefix.realpath,
|
|
Formula["gcc"].opt_prefix,
|
|
check_replace
|
|
end
|
|
|
|
def post_install
|
|
short_version =
|
|
`#{bin}/Rscript -e 'cat(as.character(getRversion()[1,1:2]))'`.strip
|
|
site_library = HOMEBREW_PREFIX/"lib/R/#{short_version}/site-library"
|
|
site_library.mkpath
|
|
ln_s site_library, lib/"R/site-library"
|
|
end
|
|
|
|
test do
|
|
assert_equal "[1] 2", shell_output("#{bin}/Rscript -e 'print(1+1)'").chomp
|
|
assert_equal shared_library(""), shell_output("#{bin}/R CMD config DYLIB_EXT").chomp
|
|
system bin/"Rscript", "-e", "if(!capabilities('cairo')) stop('cairo not available')"
|
|
|
|
system bin/"Rscript", "-e", "install.packages('gss', '.', 'https://cloud.r-project.org')"
|
|
assert_predicate testpath/"gss/libs/gss.so", :exist?,
|
|
"Failed to install gss package"
|
|
|
|
winsys = "[1] \"aqua\""
|
|
if OS.linux?
|
|
return if ENV["HOMEBREW_GITHUB_ACTIONS"]
|
|
|
|
winsys = "[1] \"x11\""
|
|
end
|
|
assert_equal winsys,
|
|
shell_output("#{bin}/Rscript -e 'library(tcltk)' -e 'tclvalue(.Tcl(\"tk windowingsystem\"))'").chomp
|
|
end
|
|
end
|