59 lines
2.4 KiB
Ruby
59 lines
2.4 KiB
Ruby
class Bamtools < Formula
|
|
desc "C++ API and command-line toolkit for BAM data"
|
|
homepage "https://github.com/pezmaster31/bamtools"
|
|
url "https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz"
|
|
sha256 "4d8b84bd07b673d0ed41031348f10ca98dd6fa6a4460f9b9668d6f1d4084dfc8"
|
|
license "MIT"
|
|
revision 1
|
|
head "https://github.com/pezmaster31/bamtools.git", branch: "master"
|
|
|
|
bottle do
|
|
sha256 cellar: :any, arm64_ventura: "58ddd12242c381fcae63a5142e1af12954965f1d4bf443c25a270fc35d5eba2d"
|
|
sha256 cellar: :any, arm64_monterey: "fd3594b78acee23bf5d260ecb30dbcc32a6c51f2c57b02fcd46f6bf6e0215741"
|
|
sha256 cellar: :any, arm64_big_sur: "a09703edb44ac45c00f1ca338736af291def439419edf571500dfec776d7c71f"
|
|
sha256 cellar: :any, ventura: "b4066241fe612379ed5ef3086f50735d4fc3217fb8e171e04e9b4491766022f2"
|
|
sha256 cellar: :any, monterey: "d81c6addc556c9d421e8a6974c3ae564c0de8291d64d0d9476dafe2cd9c8e5f0"
|
|
sha256 cellar: :any, big_sur: "ae4c20d973c8ed46a430c668bcbc2b6ac4c32a9241bd989bf8c3afe3cc0f57da"
|
|
sha256 cellar: :any, catalina: "4bd0d24b3301ba788bc79cdf12f07dbf499347dce3beb9250e7ec6e12b6670a9"
|
|
sha256 cellar: :any_skip_relocation, x86_64_linux: "5909b02859753489fe8e24652053afdca942f6d88b13f110a0d04650478c81a9"
|
|
end
|
|
|
|
depends_on "cmake" => :build
|
|
depends_on "pkg-config" => :build
|
|
depends_on "jsoncpp"
|
|
|
|
uses_from_macos "zlib"
|
|
|
|
def install
|
|
# Delete bundled jsoncpp to avoid fallback
|
|
(buildpath/"src/third_party/jsoncpp").rmtree
|
|
|
|
# Build shared library
|
|
system "cmake", "-S", ".", "-B", "build_shared",
|
|
"-DBUILD_SHARED_LIBS=ON",
|
|
"-DCMAKE_INSTALL_RPATH=#{rpath}",
|
|
*std_cmake_args
|
|
system "cmake", "--build", "build_shared"
|
|
system "cmake", "--install", "build_shared"
|
|
|
|
# Build static library
|
|
system "cmake", "-S", ".", "-B", "build_static", *std_cmake_args
|
|
system "cmake", "--build", "build_static"
|
|
lib.install "build_static/src/libbamtools.a"
|
|
end
|
|
|
|
test do
|
|
(testpath/"test.cpp").write <<~EOS
|
|
#include "api/BamWriter.h"
|
|
using namespace BamTools;
|
|
int main() {
|
|
BamWriter writer;
|
|
writer.Close();
|
|
}
|
|
EOS
|
|
system ENV.cxx, "test.cpp", "-I#{include}/bamtools", "-L#{lib}",
|
|
"-lbamtools", "-lz", "-o", "test"
|
|
system "./test"
|
|
end
|
|
end
|