52 lines
1.4 KiB
Ruby
52 lines
1.4 KiB
Ruby
class Spades < Formula
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include Language::Python::Shebang
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desc "De novo genome sequence assembly"
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homepage "https://cab.spbu.ru/software/spades/"
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url "https://github.com/ablab/spades/releases/download/v3.14.1/SPAdes-3.14.1.tar.gz"
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mirror "https://cab.spbu.ru/files/release3.14.1/SPAdes-3.14.1.tar.gz"
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sha256 "d629b78f7e74c82534ac20f5b3c2eb367f245e6840a67b9ef6a76f6fac5323ca"
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license "GPL-2.0"
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revision 1
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livecheck do
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url "https://cab.spbu.ru/files/?C=M&O=D"
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regex(%r{href=.*?release(\d+(?:\.\d+)+)/?["' >]}i)
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end
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bottle do
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cellar :any_skip_relocation
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sha256 "a6f57aca314cbe6d46554308a1b6a54c6c76bab341ac0813e9d0e68187428023" => :catalina
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sha256 "0f536b922fba137fca8f2ba6634a90fc09e71b683342a0d331ac2bd1676d5fac" => :mojave
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sha256 "c2bc400de41d30e04ad78cdc1894a5c9af1a15a237ae6aa71d73d2807b93e029" => :high_sierra
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end
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depends_on "cmake" => :build
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depends_on "python@3.8"
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uses_from_macos "bzip2"
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uses_from_macos "ncurses"
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uses_from_macos "zlib"
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on_macos do
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depends_on "libomp"
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end
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on_linux do
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depends_on "jemalloc"
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depends_on "readline"
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end
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def install
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mkdir "src/build" do
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system "cmake", "..", *std_cmake_args
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system "make", "install"
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end
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bin.find { |f| rewrite_shebang detected_python_shebang, f }
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end
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test do
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assert_match "TEST PASSED CORRECTLY", shell_output("#{bin}/spades.py --test")
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end
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end
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