34 lines
1.5 KiB
Ruby
34 lines
1.5 KiB
Ruby
class Bedops < Formula
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desc "Set and statistical operations on genomic data of arbitrary scale"
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homepage "https://github.com/bedops/bedops"
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url "https://github.com/bedops/bedops/archive/v2.4.41.tar.gz"
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sha256 "3b868c820d59dd38372417efc31e9be3fbdca8cf0a6b39f13fb2b822607d6194"
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license "GPL-2.0-or-later"
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bottle do
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sha256 cellar: :any_skip_relocation, arm64_monterey: "fa0e42d870cb2e5fd71ecfe637ec760352eb571074aa19156564f8fd1fc0cb2f"
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sha256 cellar: :any_skip_relocation, arm64_big_sur: "4716026be4f889b0c6ea10e8288be373cac72224aa63376b08192ab07f440d5c"
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sha256 cellar: :any_skip_relocation, ventura: "cfc5f580c14bc11bad34d5b8b5ff6b84180ef5238a86d7b67ab9ffde4699a611"
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sha256 cellar: :any_skip_relocation, monterey: "044fcad68d63ce2863dc43d69cbcff7b0b8d519086565ab8a2fa654b07f78bf0"
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sha256 cellar: :any_skip_relocation, big_sur: "12419efcde367c515fd963910d949141e3b95ff57c288730ba6e176499e519a2"
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sha256 cellar: :any_skip_relocation, catalina: "394609dcde4bcafc5ce17c92e2fa0a0a98761aa7127c697c55af8bf66ae5838c"
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sha256 cellar: :any_skip_relocation, x86_64_linux: "a70293dadd6ad59de7bdb253081cb4b954b0b50008cd9f996ec81e30e043b83a"
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end
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def install
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system "make"
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system "make", "install", "BINDIR=#{bin}"
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end
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test do
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(testpath/"first.bed").write <<~EOS
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chr1\t100\t200
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EOS
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(testpath/"second.bed").write <<~EOS
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chr1\t300\t400
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EOS
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output = shell_output("#{bin}/bedops --complement first.bed second.bed")
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assert_match "chr1\t200\t300", output
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end
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end
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