39 lines
2.1 KiB
Ruby
39 lines
2.1 KiB
Ruby
class Seqtk < Formula
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desc "Toolkit for processing sequences in FASTA/Q formats"
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homepage "https://github.com/lh3/seqtk"
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url "https://github.com/lh3/seqtk/archive/v1.3.tar.gz"
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sha256 "5a1687d65690f2f7fa3f998d47c3c5037e792f17ce119dab52fff3cfdca1e563"
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license "MIT"
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bottle do
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sha256 cellar: :any_skip_relocation, arm64_ventura: "e6cf3d61b32d87a06c5f10459779e4d8694cdac21a315654c447bc56ed3f4e00"
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sha256 cellar: :any_skip_relocation, arm64_monterey: "f31a109971c3906efdec050e77ae151e16f3c54410d3b9ee4b229839b610eb0d"
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sha256 cellar: :any_skip_relocation, arm64_big_sur: "4e1d4c35dc64c5ea008ecb2e83bfc5d7a4047256e37923a981e5a6cd6038f368"
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sha256 cellar: :any_skip_relocation, ventura: "3afddde22ed6a5e2cb5c49389ea6894c758624f34ca09e64430a14385293085e"
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sha256 cellar: :any_skip_relocation, monterey: "b9b943a7ee965c28916f2db8dd49e734022e74a5fce1e78af2fef017649c9b72"
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sha256 cellar: :any_skip_relocation, big_sur: "bdcc9b85644f98bbcdffbb84816e40714c254f8e9e8c8e5c042b4d25496e0010"
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sha256 cellar: :any_skip_relocation, catalina: "5abbf374f3dab69b198b98a3126f521b64baf01ac5ed69b99be91ffd97f891f8"
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sha256 cellar: :any_skip_relocation, mojave: "b695a43103700d7d0d4a07d50d8effec280f7d7a781ff518a42dec2bef44801e"
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sha256 cellar: :any_skip_relocation, high_sierra: "4f377caf93e5d334e739375a5dcf06782f1d85516988a26df3f8f53d172b1e6f"
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sha256 cellar: :any_skip_relocation, sierra: "fd3ecced5ba8f5a9eab13f8f2184f6a69d08b58c1ef53ad6e74bb45cab9324f4"
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sha256 cellar: :any_skip_relocation, el_capitan: "55541e7e9249ef15bd4423ad9a45903918c2b4b54f632bc0472fb24aee683701"
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sha256 cellar: :any_skip_relocation, x86_64_linux: "9725834121170e1a61b42865512da270435a30ef49f95ff070179baabd655717"
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end
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uses_from_macos "zlib"
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def install
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system "make"
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bin.install "seqtk"
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end
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test do
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(testpath/"test.fasta").write <<~EOS
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>U00096.2:1-70
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AGCTTTTCATTCTGACTGCAACGGGCAATATGTCT
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CTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC
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EOS
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assert_match "TCTCTG", shell_output("#{bin}/seqtk seq test.fasta")
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end
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end
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