31 lines
1.5 KiB
Ruby
31 lines
1.5 KiB
Ruby
class Lastz < Formula
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desc "Pairwise aligner for DNA sequences"
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homepage "https://lastz.github.io/lastz/"
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url "https://github.com/lastz/lastz/archive/refs/tags/1.04.22.tar.gz"
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sha256 "4c829603ba4aed7ddf64255b528cd88850e4557382fca29580d3576c25c5054a"
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license "MIT"
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head "https://github.com/lastz/lastz.git", branch: "master"
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bottle do
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sha256 cellar: :any_skip_relocation, arm64_monterey: "0079336e54ddda2906063ae8e1345c285b907945ee992908bf2911298995a9e4"
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sha256 cellar: :any_skip_relocation, arm64_big_sur: "869cf05ab0957ebf07fda9c95fe6e853610383a07f85f93a0b8efbd0a412b642"
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sha256 cellar: :any_skip_relocation, monterey: "9ce7a7414d2cda02aa35efe3b9dfe418c8b6cdda4b58322a5554488c79a2d85a"
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sha256 cellar: :any_skip_relocation, big_sur: "bbf2688ff167ad24a18a218b1ba24175d06a9ea1a13f63914565b240848250ab"
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sha256 cellar: :any_skip_relocation, catalina: "9870cfbbcdee4b2512ef695f80c5bbc4f15bbbb98738009c7d7ea1a936016020"
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sha256 cellar: :any_skip_relocation, x86_64_linux: "46d6ba10ae062a21f3538006e2415897b089d50f264a6e048a81f210765435e3"
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end
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def install
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system "make", "install", "definedForAll=-Wall", "LASTZ_INSTALL=#{bin}"
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doc.install "README.lastz.html"
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pkgshare.install "test_data", "tools"
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end
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test do
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assert_match version.to_s, shell_output("#{bin}/lastz --version", 1)
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assert_match "MAF", shell_output("#{bin}/lastz --help=formats", 1)
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dir = pkgshare/"test_data"
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assert_match "#:lav", shell_output("#{bin}/lastz #{dir}/pseudocat.fa #{dir}/pseudopig.fa")
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end
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end
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