32 lines
1007 B
Ruby
32 lines
1007 B
Ruby
class Spades < Formula
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desc "De novo genome sequence assembly"
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homepage "http://cab.spbu.ru/software/spades/"
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url "http://cab.spbu.ru/files/release3.12.0/SPAdes-3.12.0.tar.gz"
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mirror "https://github.com/ablab/spades/releases/download/v3.12.0/SPAdes-3.12.0.tar.gz"
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sha256 "15b48a3bcbbe6a8ad58fd04ba5d3f1015990fbfd9bdf4913042803b171853ac7"
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bottle do
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cellar :any
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sha256 "78874d080a73cb1857695748ce7d92b14835689397682171fa9b5649de15ff69" => :high_sierra
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sha256 "9108c70c0f648e7222d7ca09cc034eabc7e3f22eaa0a7d72a311458b4d95373b" => :sierra
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sha256 "8c9762bec98f635611d8d880ff81065e8c01568da0dd2cb59870c77e307d9c6f" => :el_capitan
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end
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depends_on "cmake" => :build
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depends_on "gcc"
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depends_on "python@2"
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fails_with :clang # no OpenMP support
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def install
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mkdir "src/build" do
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system "cmake", "..", *std_cmake_args
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system "make", "install"
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end
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end
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test do
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assert_match "TEST PASSED CORRECTLY", shell_output("#{bin}/spades.py --test")
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end
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end
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