32 lines
991 B
Ruby
32 lines
991 B
Ruby
class Bedops < Formula
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desc "Set and statistical operations on genomic data of arbitrary scale"
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homepage "https://github.com/bedops/bedops"
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url "https://github.com/bedops/bedops/archive/v2.4.35.tar.gz"
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sha256 "da0265cf55ef5094834318f1ea4763d7a3ce52a6900e74f532dd7d3088c191fa"
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bottle do
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cellar :any_skip_relocation
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sha256 "d505812bddf22f9c7b912c5cd7b0f7a5f197bf2fa318ec67c38d899cbc5eaefd" => :high_sierra
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sha256 "3944dbf5ed3a6c2ff825099cdf3d65e0f8aad2de67604ce0523a0468a8832894" => :sierra
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sha256 "a860bbe9e2aa2d5289aa0d960bb01212841f71732eb1e913c8364de46f62708c" => :el_capitan
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end
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needs :cxx11
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def install
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system "make"
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system "make", "install", "BINDIR=#{bin}"
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end
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test do
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(testpath/"first.bed").write <<~EOS
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chr1\t100\t200
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EOS
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(testpath/"second.bed").write <<~EOS
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chr1\t300\t400
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EOS
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output = shell_output("#{bin}/bedops --complement first.bed second.bed")
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assert_match "chr1\t200\t300", output
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end
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end
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