homebrew-core/Formula/r.rb

157 lines
5.1 KiB
Ruby

class R < Formula
desc "Software environment for statistical computing"
homepage "https://www.r-project.org/"
url "https://cran.r-project.org/src/base/R-4/R-4.2.1.tar.gz"
sha256 "4d52db486d27848e54613d4ee977ad952ec08ce17807e1b525b10cd4436c643f"
license "GPL-2.0-or-later"
revision 4
livecheck do
url "https://cran.rstudio.com/banner.shtml"
regex(%r{href=(?:["']?|.*?/)R[._-]v?(\d+(?:\.\d+)+)\.t}i)
end
bottle do
sha256 arm64_monterey: "ed1030079de71b09c49e2cc30fa360e9d22d58e1bf55a9e38587ca61b64dc158"
sha256 arm64_big_sur: "a82f348f515cc6d6d24ce2dbb3cbe376197575cf209288f6cc7ebda2f579e0da"
sha256 monterey: "4ea2cca706f3823dd6bcc7ceec89fe69e74b6fe1c3a9be11cff2e1ea82d9082e"
sha256 big_sur: "a5d64662b14c9669f3a58f1c6ad30982db60d681e299a5163780af6c313c3835"
sha256 catalina: "47102a6ac8b6b65ef81f3c7b015a016b265832a9a7b7d8621e1e2febbfbcd63c"
sha256 x86_64_linux: "2816d8239944b0c3f143e6e263568c228d3206496eaa7a2b37705f5c8105cb22"
end
depends_on "pkg-config" => :build
depends_on "cairo"
depends_on "gcc" # for gfortran
depends_on "gettext"
depends_on "jpeg-turbo"
depends_on "libpng"
depends_on "openblas"
depends_on "pcre2"
depends_on "readline"
depends_on "tcl-tk"
depends_on "xz"
uses_from_macos "curl"
uses_from_macos "icu4c"
uses_from_macos "libffi", since: :catalina
on_linux do
depends_on "libice"
depends_on "libtirpc"
depends_on "libx11"
depends_on "libxt"
depends_on "pango"
end
# needed to preserve executable permissions on files without shebangs
skip_clean "lib/R/bin", "lib/R/doc"
fails_with :gcc do
version "11"
cause "Unknown. FIXME."
end
def install
# BLAS detection fails with Xcode 12 due to missing prototype
# https://bugs.r-project.org/bugzilla/show_bug.cgi?id=18024
ENV.append "CFLAGS", "-Wno-implicit-function-declaration"
args = [
"--prefix=#{prefix}",
"--enable-memory-profiling",
"--with-tcl-config=#{Formula["tcl-tk"].opt_lib}/tclConfig.sh",
"--with-tk-config=#{Formula["tcl-tk"].opt_lib}/tkConfig.sh",
"--with-blas=-L#{Formula["openblas"].opt_lib} -lopenblas",
"--enable-R-shlib",
"--disable-java",
"--with-cairo",
# This isn't necessary to build R, but it's saved in Makeconf
# and helps CRAN packages find gfortran when Homebrew may not be
# in PATH (e.g. under RStudio, launched from Finder)
"FC=#{Formula["gcc"].opt_bin}/gfortran",
]
if OS.mac?
args << "--without-x"
args << "--with-aqua"
else
args << "--libdir=#{lib}" # avoid using lib64 on CentOS
# Avoid references to homebrew shims
args << "LD=ld"
# If LDFLAGS contains any -L options, configure sets LD_LIBRARY_PATH to
# search those directories. Remove -LHOMEBREW_PREFIX/lib from LDFLAGS.
ENV.remove "LDFLAGS", "-L#{HOMEBREW_PREFIX}/lib"
ENV.append "CPPFLAGS", "-I#{Formula["libtirpc"].opt_include}/tirpc"
ENV.append "LDFLAGS", "-L#{Formula["libtirpc"].opt_lib}"
end
# Help CRAN packages find gettext and readline
["gettext", "readline", "xz"].each do |f|
ENV.append "CPPFLAGS", "-I#{Formula[f].opt_include}"
ENV.append "LDFLAGS", "-L#{Formula[f].opt_lib}"
end
system "./configure", *args
system "make"
ENV.deparallelize do
system "make", "install"
end
cd "src/nmath/standalone" do
system "make"
ENV.deparallelize do
system "make", "install"
end
end
r_home = lib/"R"
# make Homebrew packages discoverable for R CMD INSTALL
inreplace r_home/"etc/Makeconf" do |s|
s.gsub!(/^CPPFLAGS =.*/, "\\0 -I#{HOMEBREW_PREFIX}/include")
s.gsub!(/^LDFLAGS =.*/, "\\0 -L#{HOMEBREW_PREFIX}/lib")
s.gsub!(/.LDFLAGS =.*/, "\\0 $(LDFLAGS)")
end
include.install_symlink Dir[r_home/"include/*"]
lib.install_symlink Dir[r_home/"lib/*"]
# avoid triggering mandatory rebuilds of r when gcc is upgraded
check_replace = OS.mac?
inreplace lib/"R/etc/Makeconf", Formula["gcc"].prefix.realpath,
Formula["gcc"].opt_prefix,
check_replace
end
def post_install
short_version =
`#{bin}/Rscript -e 'cat(as.character(getRversion()[1,1:2]))'`.strip
site_library = HOMEBREW_PREFIX/"lib/R/#{short_version}/site-library"
site_library.mkpath
ln_s site_library, lib/"R/site-library"
end
test do
assert_equal "[1] 2", shell_output("#{bin}/Rscript -e 'print(1+1)'").chomp
assert_equal shared_library(""), shell_output("#{bin}/R CMD config DYLIB_EXT").chomp
system bin/"Rscript", "-e", "if(!capabilities('cairo')) stop('cairo not available')"
system bin/"Rscript", "-e", "install.packages('gss', '.', 'https://cloud.r-project.org')"
assert_predicate testpath/"gss/libs/gss.so", :exist?,
"Failed to install gss package"
winsys = "[1] \"aqua\""
if OS.linux?
return if ENV["HOMEBREW_GITHUB_ACTIONS"]
winsys = "[1] \"x11\""
end
assert_equal winsys,
shell_output("#{bin}/Rscript -e 'library(tcltk)' -e 'tclvalue(.Tcl(\"tk windowingsystem\"))'").chomp
end
end