63 lines
2.2 KiB
Ruby
63 lines
2.2 KiB
Ruby
class Jags < Formula
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desc "Just Another Gibbs Sampler for Bayesian MCMC simulation"
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homepage "https://mcmc-jags.sourceforge.io"
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url "https://downloads.sourceforge.net/project/mcmc-jags/JAGS/4.x/Source/JAGS-4.3.0.tar.gz"
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sha256 "8ac5dd57982bfd7d5f0ee384499d62f3e0bb35b5f1660feb368545f1186371fc"
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revision 2
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livecheck do
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url :stable
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regex(%r{url=.*?/JAGS[._-]v?(\d+(?:\.\d+)+)\.t}i)
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end
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bottle do
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rebuild 1
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sha256 cellar: :any, arm64_monterey: "e2562319bd140af62e154596b8c9f42511c0907d77d0e5ce4b3579f5752af20a"
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sha256 cellar: :any, arm64_big_sur: "ea0be62c30efa7d985684c3295af0fa972596ed029622af0cf409740d3658c2e"
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sha256 cellar: :any, monterey: "a8b0f9f5bcdef8dd9cf4ccff73d2b3076a8e445c4e565e525c2c4ef9f1a5c01c"
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sha256 cellar: :any, big_sur: "72c2e292449224ec4b825399233be7de57fff2b810c7d31d738386c829a53098"
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sha256 cellar: :any, catalina: "11423ce61e9c8c567179c82e03179427ee9161808ff7256ffca47f72030359b7"
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sha256 cellar: :any, mojave: "9e1448b73ba0853385cdfd2861fd273588a6a8557522f0d3073f50154130e900"
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sha256 cellar: :any_skip_relocation, x86_64_linux: "291114d6ec1984a0942fe9f7421d481d92ef96e1a510ceaa4391ff88ac11a7e5"
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end
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depends_on "gcc" # for gfortran
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on_linux do
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depends_on "openblas"
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end
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# Fix -flat_namespace being used on Big Sur and later.
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patch do
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url "https://raw.githubusercontent.com/Homebrew/formula-patches/03cf8088210822aa2c1ab544ed58ea04c897d9c4/libtool/configure-big_sur.diff"
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sha256 "35acd6aebc19843f1a2b3a63e880baceb0f5278ab1ace661e57a502d9d78c93c"
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end
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def install
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system "./configure", "--disable-dependency-tracking",
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"--prefix=#{prefix}"
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system "make", "install"
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end
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test do
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(testpath/"model.bug").write <<~EOS
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data {
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obs <- 1
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}
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model {
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parameter ~ dunif(0,1)
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obs ~ dbern(parameter)
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}
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EOS
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(testpath/"script").write <<~EOS
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model in model.bug
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compile
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initialize
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monitor parameter
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update 100
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coda *
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EOS
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system "#{bin}/jags", "script"
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end
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end
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