homebrew-core/Formula/snakemake.rb

36 lines
1.2 KiB
Ruby

class Snakemake < Formula
desc "Pythonic workflow system"
homepage "https://bitbucket.org/snakemake/snakemake/wiki/Home"
url "https://pypi.python.org/packages/source/s/snakemake/snakemake-3.5.5.tar.gz"
sha256 "1f13667fd0dea7d2f35414399646288b8aece2cf9791566992001d95d123eb1b"
bottle do
cellar :any_skip_relocation
sha256 "782c11c3d9aa78d79cc6241bac326baae5a56d53f0e3e878e03539b0c1032017" => :el_capitan
sha256 "75d1e54fa745a3ae4bceacd30521e696789782b03465462b914ce8f06fc01018" => :yosemite
sha256 "a5bb0c91f5632b86e0684545fe36600349ced8643e0d98034c62eaf97580ce55" => :mavericks
end
depends_on :python3
def install
xy = Language::Python.major_minor_version "python3"
ENV.prepend_create_path "PYTHONPATH", libexec/"lib/python#{xy}/site-packages"
system "python3", *Language::Python.setup_install_args(libexec)
bin.install Dir[libexec/"bin/*"]
bin.env_script_all_files(libexec/"bin", :PYTHONPATH => ENV["PYTHONPATH"])
end
test do
(testpath/"Snakefile").write <<-EOS.undent
rule testme:
output:
"test.out"
shell:
"touch {output}"
EOS
system "#{bin}/snakemake"
end
end