homebrew-core/Formula/igv.rb

31 lines
1.0 KiB
Ruby

class Igv < Formula
desc "Interactive Genomics Viewer"
homepage "https://www.broadinstitute.org/software/igv"
url "https://data.broadinstitute.org/igv/projects/downloads/2.8/IGV_2.8.13.zip"
sha256 "95c90ac4327c5bc135cd0c94f66123930bd05050f3a64271b00cca5b52ae9fc6"
livecheck do
url "https://software.broadinstitute.org/software/igv/download"
regex(/href=.*?IGV[._-]v?(\d+(?:\.\d+)+)\.zip/i)
end
bottle :unneeded
depends_on "openjdk"
def install
inreplace ["igv.sh", "igvtools"], /^prefix=.*/, "prefix=#{libexec}"
bin.install "igv.sh" => "igv"
bin.install "igvtools"
libexec.install "igv.args", "lib"
bin.env_script_all_files libexec, JAVA_HOME: Formula["openjdk"].opt_prefix
end
test do
assert_match "Usage:", shell_output("#{bin}/igvtools")
assert_match "org/broad/igv/ui/IGV.class", shell_output("#{Formula["openjdk"].bin}/jar tf #{libexec}/lib/igv.jar")
(testpath/"script").write "exit"
assert_match "Version", shell_output("#{bin}/igv -b script")
end
end