50 lines
1.8 KiB
Ruby
50 lines
1.8 KiB
Ruby
class Genometools < Formula
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desc "Versatile open source genome analysis software"
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homepage "http://genometools.org/"
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# genometools does not have source code on par with their binary dist on their website
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url "https://github.com/genometools/genometools/archive/v1.6.1.tar.gz"
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sha256 "528ca143a7f1d42af8614d60ea1e5518012913a23526d82e434f0dad2e2d863f"
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license "ISC"
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revision 2
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head "https://github.com/genometools/genometools.git"
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bottle do
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sha256 cellar: :any, arm64_big_sur: "24dfec7e6f01320e9138d4f9a33bcff280238912e7394eeae02342bf2242f01c"
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sha256 cellar: :any, big_sur: "5a78346ddcbc387c855086ddd5dc3572b03c08b37364025e99e8e3d13ef62746"
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sha256 cellar: :any, catalina: "707d87995a1fd3153e9020630b8645f35b387ec0610950dcbcc61da8afb172e0"
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sha256 cellar: :any, mojave: "f2d6eba092bf144f8184ce648af3e75a2097359eda4efa7c9eabf314a30d00d1"
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sha256 cellar: :any, high_sierra: "5606993111552191b2e9215b06665bf0043c9851a6dd60c9927a32c94d0b2d4b"
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end
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depends_on "pkg-config" => :build
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depends_on "cairo"
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depends_on "pango"
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depends_on "python@3.9"
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on_linux do
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depends_on "libpthread-stubs" => :build
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end
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conflicts_with "libslax", because: "both install `bin/gt`"
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def install
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system "make", "prefix=#{prefix}"
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system "make", "install", "prefix=#{prefix}"
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cd "gtpython" do
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# Use the shared library from this specific version of genometools.
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inreplace "gt/dlload.py",
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"gtlib = CDLL(\"libgenometools\" + soext)",
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"gtlib = CDLL(\"#{lib}/libgenometools\" + soext)"
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system "python3", *Language::Python.setup_install_args(prefix)
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system "python3", "-m", "unittest", "discover", "tests"
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end
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end
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test do
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system "#{bin}/gt", "-test"
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system Formula["python@3.9"].opt_bin/"python3", "-c", "import gt"
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end
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end
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