33 lines
996 B
Ruby
33 lines
996 B
Ruby
class Bedtools < Formula
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desc "Tools for genome arithmetic (set theory on the genome)"
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homepage "https://github.com/arq5x/bedtools2"
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url "https://github.com/arq5x/bedtools2/archive/v2.29.2.tar.gz"
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sha256 "bc2f36b5d4fc9890c69f607d54da873032628462e88c545dd633d2c787a544a5"
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license "MIT"
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bottle do
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cellar :any
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sha256 "4cdd660e64c7d78876a2ccf60eec8891f484cdd24e2c40ce36800828dffcce1c" => :catalina
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sha256 "5c40ac3daf8ba6022cd5229aac50458d80b14920ddd513f2e165b233c9e95e72" => :mojave
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sha256 "2f534f9efbdd387764924f2a9e3a08b435cab0ff0a0edabd6bafe8fa4123af6a" => :high_sierra
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end
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depends_on "python@3.8" => :build
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depends_on "xz"
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uses_from_macos "bzip2"
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uses_from_macos "zlib"
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def install
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inreplace "Makefile", "python", "python3"
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system "make"
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system "make", "install", "prefix=#{prefix}"
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end
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test do
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(testpath/"t.bed").write "c\t1\t5\nc\t4\t9"
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assert_equal "c\t1\t9", shell_output("#{bin}/bedtools merge -i t.bed").chomp
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end
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end
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