2017-12-11 20:23:39 +00:00
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class Prodigal < Formula
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desc "Microbial gene prediction"
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homepage "https://github.com/hyattpd/Prodigal"
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url "https://github.com/hyattpd/Prodigal/archive/v2.6.3.tar.gz"
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sha256 "89094ad4bff5a8a8732d899f31cec350f5a4c27bcbdd12663f87c9d1f0ec599f"
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2017-12-14 13:04:59 +00:00
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bottle do
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cellar :any_skip_relocation
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sha256 "c120fed8e29bb3b1a4ff69d5ca05e051a0fe3822784b3d585e142da3452d1ac1" => :high_sierra
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sha256 "a27fe5316181d4826e5aa5291d0fc1b1a7087c32c7b4e6aedabf1209d5a8ac36" => :sierra
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sha256 "70b432e3d3da1f4089680b06c0745b7dac3611f05d8ec9440faa918bc82d6fe5" => :el_capitan
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end
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2017-12-11 20:23:39 +00:00
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def install
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system "make", "install", "INSTALLDIR=#{bin}"
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end
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test do
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fasta = <<~EOS
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>U00096.2:1-70
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AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTCTGATAGCAGC
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EOS
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assert_match "CDS", pipe_output("#{bin}/prodigal -q -p meta", fasta, 0)
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end
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end
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