1. [Androwarn](https://github.com/maaaaz/androwarn/) - detect and warn the user about potential malicious behaviours developped by an Android application.
* [CFGScanDroid](https://github.com/douggard/CFGScanDroid) - Scans and compares CFG against CFG of malicious applications
* [Madrolyzer](https://github.com/maldroid/maldrolyzer) - extracts actionable data like C&C, phone number etc.
* [SPARTA](http://www.cs.washington.edu/sparta) - verifies (proves) that an app satisfies an information-flow security policy; built on the [Checker Framework](http://checkerframework.org/)
* [Android Malware Analysis Toolkit](http://www.mobilemalware.com.br/amat/download.html) - (linux distro) Earlier it use to be an [online analyzer](http://dunkelheit.com.br/amat/analysis/index_en.html)
* [AppUse](https://appsec-labs.com/AppUse) – custom build for pentesting
* [Cobradroid](http://thecobraden.com/projects/cobradroid/) – custom image for malware analysis
* [ViaLab Community Edition](https://viaforensics.com/product-updates/introducing-vialab-community-edition.html)
* [Xposed](http://forum.xda-developers.com/showthread.php?t=1574401) - equivalent of doing Stub based code injection but without any modifications to the binary
* [Android Hooker](https://github.com/AndroidHooker/hooker) - API Hooking of java methods triggered by any Android application (requires the Substrate Framework)
* [Droidscope](https://code.google.com/p/decaf-platform/wiki/DroidScope) - custom image for dynamic analysis
* [CuckooDroid](https://github.com/idanr1986/cuckoo-droid) - Android extension for Cuckoo sandbox
* [Mem](https://github.com/MobileForensicsResearch/mem) - Memory analysis of Android (root required)
* [Crowdroid](http://www.ida.liu.se/labs/rtslab/publications/2011/spsm11-burguera.pdf) – unable to find the actual tool
* [AuditdAndroid](https://github.com/nwhusted/AuditdAndroid) – android port of auditd, not under active development anymore
* [Android Security Evaluation Framework](https://code.google.com/p/asef/) - not under active development anymore
* [Android Reverse Engineering](https://redmine.honeynet.org/projects/are/wiki) – ARE (android reverse engineering) not under active development anymore
* [Aurasium](https://github.com/xurubin/aurasium) – Practical security policy enforcement for Android apps via bytecode rewriting and in-place reference monitor.
* [Android Linux Kernel modules](https://github.com/strazzere/android-lkms)
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* [Appie](http://manifestsecurity.com/appie/) - Appie is a software package that has been pre-configured to function as an Android Pentesting Environment.It is completely portable and can be carried on USB stick or smartphone.This is a one stop answer for all the tools needed in Android Application Security Assessment and an awesome alternative to existing virtual machines.
* [StaDynA](https://github.com/zyrikby/StaDynA) - a system supporting security app analysis in the presence of dynamic code update features (dynamic class loading and reflection). This tool combines static and dynamic analysis of Android applications in order to reveal the hidden/updated behavior and extend static analysis results with this information.
* [MalGenome](http://www.malgenomeproject.org/policy.html) - contains 1260 malware samples categorized into 49 different malware families, free for research purpose.
* [VirusTotal Malware Intelligence Service](https://www.virustotal.com/en/about/contact/) - powered by VirusTotal,not free