Fix pre-commit hook + linting jobs for OAPEN engine (#14)

* sync upstream

* isort, black, flake8 precommit hook

* Ignore bin

* reset bin

* reset bin

* try to fix black

* remove bin!

* update gh action

.flake8

@@ -0,0 +1,5 @@
+[flake8]
+max-line-length = 88
+max-complexity = 18
+select = B,C,E,F,W,T4,B9
+ignore = E203, E266, E501, W503, F403, F401

.github/workflows/engine.yml

@@ -22,7 +22,7 @@ jobs:
           pipenv install --deploy --dev
           pipenv run isort --profile black src/
           pipenv run black --check src/ --exclude="lib/*"
-          pipenv run flake8 src/ --ignore="lib/* W" 
+          pipenv run flake8 src/ --ignore="lib/*, W, E203, E266, E501, W503, F403, F401"
           pipenv run pytest
         
       

.isort.cfg

@@ -0,0 +1,9 @@
+[settings]
+multi_line_output=3
+include_trailing_comma=True
+force_grid_wrap=0
+use_parentheses=True
+line_length=88
+skip=[lib/, bin/]
+profile=black
+known_third_party = data,lib,model,nltk,pandas,psycopg2,requests

.pre-commit-config.yaml

@@ -1,18 +1,14 @@
 repos:
-  - repo: https://github.com/pycqa/isort
-    rev: 5.10.1
+-   repo: https://github.com/pre-commit/mirrors-isort
+    rev: v5.10.1
     hooks:
-      - id: isort
-        args: [--profile, black, --filter-files, oapen-engine/src]
-        name: isort (python)
-  -   repo: https://github.com/psf/black
-      rev: stable
-      hooks:
-      - id: black
-        language_version: python3.10
-        args: [oapen-engine/src]
-  -   repo: https://github.com/pre-commit/pre-commit-hooks
-      rev: v1.2.3
-      hooks:
-      - id: flake8
-        args: [oapen-engine/src]
+    - id: isort
+-   repo: https://github.com/ambv/black
+    rev: 22.10.0
+    hooks:
+    - id: black
+      language_version: python3.10
+-   repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v2.3.0
+    hooks:
+    - id: flake8

oapen-engine/.gitignore

@@ -161,4 +161,7 @@ cython_debug/
 
 database.ini
 lib/python3.7/
-lib/python3.10/
+lib/python3.10/
+bin/
+.pytest_cache
+lib/

pyproject.toml

@@ -0,0 +1,22 @@
+[tool.black]
+line-length = 88
+include = '\.pyi?$'
+exclude = '''
+/(
+    \.git
+  | \.hg
+  | \.mypy_cache
+  | \.tox
+  | \.venv
+  | _build
+  | buck-out
+  | build
+  | dist
+  | lib
+  | ./oapen-engine/lib
+  | __pycache__
+  | bin
+  | ./oapen-engine/bin
+  | 
+)/
+'''

setup.cfg

@@ -1,18 +0,0 @@
-[isort]
-multi_line_output=3
-include_trailing_comma=True
-force_grid_wrap=0
-use_parentheses=True
-line_length=88
-skip=[lib/]
-profile=black
-
-[flake8]
-ignore = E203, E266, E501, W503, E501
-max-line-length = 88
-max-complexity = 18
-select = B,C,E,F,W,T4
-exclude=.git,lib,__pycache__
-
-[tool:pytest]
-testpaths=src/test